Transcript: lnc-RRP8-6:1

Basic information

LNCipedia transcript ID: lnc-RRP8-6:1 
LNCipedia gene ID: lnc-RRP8-6
Location (hg19): chr11:6611410-6612438
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1029 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA261:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.2136 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RRP8-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RRP8-6:1
4.1 lnc-RRP8-6:1
5.0 lnc-RRP8-6:1
5.1 lnc-CAVIN3-16:1
5.2 lnc-RRP8-6:1