Transcript: lnc-RTKN2-2:2

Basic information

LNCipedia transcript ID: lnc-RTKN2-2:2 
LNCipedia gene ID: lnc-RTKN2-2
Location (hg19): chr10:64098437-64133994
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3544 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000118287.1|MICT00000042744.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.8583 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTKN2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RTKN2-2:2
5.0 lnc-RTKN2-2:2
5.1 lnc-C10orf105-94:2
5.2 lnc-RTKN2-2:2