Transcript: lnc-RTL1-6:1

Basic information

LNCipedia transcript ID: lnc-RTL1-6:1 
LNCipedia gene ID: lnc-RTL1-6
Location (hg19): chr14:101819694-101822512
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1953 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022880; NONHSAT040019
Alternative gene names: XLOC_011134; linc-RTL1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.8873 non-coding 
CPAT coding probability 8.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTL1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RTL1-5:1
3.1 lnc-RTL1-6:1
4.0 lnc-RTL1-6:1
4.1 lnc-RTL1-6:1
5.0 lnc-RTL1-6:1
5.1 lnc-HSP90AA1-6:13
5.2 lnc-RTL1-6:1