Transcript: lnc-RTP4-6:1

Basic information

LNCipedia transcript ID: lnc-RTP4-6:1 
LNCipedia gene ID: lnc-RTP4-6
Location (hg19): chr3:187455924-187463250
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7327 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223401.1|MICT00000256697.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.051 non-coding 
CPAT coding probability 64.24% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RTP4-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-211G3.3.1-1:2
5.0 lnc-RP11-211G3.3.1-1:2
5.1 lnc-FAM131A-52:1
5.2 lnc-RTP4-6:1