Transcript: lnc-RUFY1-4:2

Basic information

LNCipedia transcript ID: lnc-RUFY1-4:2 
LNCipedia gene ID: lnc-RUFY1-4
Location (hg19): chr5:178950374-178952136
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1218 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105587
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.9284 non-coding 
CPAT coding probability 86.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RUFY1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RUFY1-4:2
4.0 lnc-RUFY1-4:2
4.1 lnc-RUFY1-4:2
5.0 lnc-RUFY1-4:2
5.1 lnc-MAML1-8:2
5.2 lnc-RUFY1-4:2