Transcript: lnc-RWDD3-1:7

Basic information

LNCipedia transcript ID: lnc-RWDD3-1:7 
LNCipedia gene ID: lnc-RWDD3-1
Location (hg19): chr1:95776483-95787167
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1651 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT004662; FPKM1_group_1058_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.6188 non-coding 
CPAT coding probability 10.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RWDD3-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RWDD3-1:7
4.0 lnc-RWDD3-1:7
4.1 lnc-RWDD3-1:7
5.0 lnc-RWDD3-1:7
5.1 lnc-BTBD8-47:7
5.2 lnc-RWDD3-1:7