Transcript: lnc-RWDD3-6:1

Basic information

LNCipedia transcript ID: lnc-RWDD3-6:1 
LNCipedia gene ID: lnc-RWDD3-6
Location (hg19): chr1:96282861-96284231
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 245 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001052; NONHSAT004685
Alternative gene names: XLOC_000311; linc-PTBP2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -323.0599 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RWDD3-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RWDD3-5:1
3.1 lnc-RWDD3-6:1
4.0 lnc-RWDD3-6:1
4.1 lnc-RWDD3-6:1
5.0 lnc-RWDD3-6:1
5.1 lnc-BTBD8-50:2
5.2 lnc-RWDD3-6:1