Transcript: lnc-RXFP2-1:2

Basic information

LNCipedia transcript ID: lnc-RXFP2-1:2 
LNCipedia gene ID: lnc-RXFP2-1
Location (hg19): chr13:32524296-32527578
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3283 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000490410
Alternative gene names: ENSG00000229715; EEF1DP3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 76.4 coding 
CPAT coding probability 98.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RXFP2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FRY-2:2
3.1 lnc-RXFP2-1:2
4.0 lnc-RXFP2-1:2
4.1 lnc-RXFP2-1:2
5.0 lnc-RXFP2-1:2
5.1 lnc-PDS5B-10:5
5.2 lnc-RXFP2-1:2