Transcript: lnc-RXFP4-2:11

Basic information

LNCipedia transcript ID: lnc-RXFP4-2:11 
LNCipedia gene ID: lnc-RXFP4-2
Location (hg19): chr1:155949054-155952809
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3144 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273002.1|MICT00000022298.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.4376 non-coding 
CPAT coding probability 10.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RXFP4-2:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RXFP4-2:11
5.0 lnc-RXFP4-2:11
5.1 lnc-RXFP4-2:11
5.2 lnc-RXFP4-2:11