Transcript: lnc-RXFP4-2:8

Basic information

LNCipedia transcript ID: lnc-RXFP4-2:8 
LNCipedia gene ID: lnc-RXFP4-2
Location (hg19): chr1:155948739-155952275
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2126 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273002.1|FTMT20300018742.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.1598 non-coding 
CPAT coding probability 22.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RXFP4-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RXFP4-2:8
5.0 lnc-RXFP4-2:8
5.1 lnc-RXFP4-2:8
5.2 lnc-RXFP4-2:8