Transcript: lnc-SASS6-2:12

Basic information

LNCipedia transcript ID: lnc-SASS6-2:12 
LNCipedia gene ID: lnc-SASS6-2
Location (hg19): chr1:100378519-100389883
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 345 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT004765
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -477.5588 non-coding 
CPAT coding probability 8.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SASS6-2:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRRS1-4:1
4.0 lnc-FRRS1-4:1
4.1 lnc-SASS6-2:12
5.0 lnc-SASS6-2:12
5.1 lnc-EXTL2-15:12
5.2 lnc-SASS6-2:12