Transcript: lnc-SASS6-2:8

Basic information

LNCipedia transcript ID: lnc-SASS6-2:8 
LNCipedia gene ID: lnc-SASS6-2
Location (hg19): chr1:100413277-100435457
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 651 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228084.1|ENCT00000029414.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -189.5568 non-coding 
CPAT coding probability 7.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SASS6-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SASS6-2:8
5.0 lnc-SASS6-2:8
5.1 lnc-EXTL2-15:8
5.2 lnc-SASS6-2:8