Transcript: lnc-SATB1-8:11

Basic information

LNCipedia transcript ID: lnc-SATB1-8:11 
LNCipedia gene ID: lnc-SATB1-8
Location (hg19): chr3:17549966-17665405
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 526 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT088550
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.9638 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SATB1-8:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SATB1-8:11
4.0 lnc-SATB1-8:11
4.1 lnc-SATB1-8:11
5.0 lnc-SATB1-8:11
5.1 lnc-SH3BP5-46:11
5.2 lnc-SATB1-8:11