Transcript: lnc-SBDS-3:1

Basic information

LNCipedia transcript ID: lnc-SBDS-3:1 
LNCipedia gene ID: lnc-SBDS-3
Location (hg19): chr7:66795257-66829655
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4561 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013855; NONHSAT121276
Alternative gene names: XLOC_006485; linc-SBDS-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 65.221 coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SBDS-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SBDS-3:1
3.1 lnc-SBDS-3:1
4.0 lnc-SBDS-3:1
4.1 lnc-SBDS-3:1
5.0 lnc-SBDS-3:1
5.1 lnc-TRIM74-73:1
5.2 lnc-SBDS-3:1