Transcript: lnc-SBDS-4:13

Basic information

LNCipedia transcript ID: lnc-SBDS-4:13 
LNCipedia gene ID: lnc-SBDS-4
Location (hg19): chr7:66004611-66007611
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1028 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000625310.1
Alternative gene names: ENSG00000229180.5; GS1-124K5.11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.7416 non-coding 
CPAT coding probability 4.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SBDS-4:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SBDS-4:13
4.1 lnc-SBDS-4:13
5.0 lnc-SBDS-4:13
5.1 lnc-TRIM74-88:7
5.2 lnc-SBDS-4:13