Transcript: lnc-SBDS-4:9

Basic information

LNCipedia transcript ID: lnc-SBDS-4:9 
LNCipedia gene ID: lnc-SBDS-4
Location (hg19): chr7:65991075-66007536
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7092 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000449307.3
Alternative gene names: ENSG00000229180.4; GS1-124K5.11; ENSG00000229180.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.5474 non-coding 
CPAT coding probability 15.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SBDS-4:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SBDS-4:9
4.0 lnc-SBDS-4:9
4.1 lnc-SBDS-4:9
5.0 lnc-SBDS-4:9
5.1 lnc-TRIM74-88:10
5.2 lnc-SBDS-4:9