Transcript: lnc-SCARB2-2:9

Basic information

LNCipedia transcript ID: lnc-SCARB2-2:9 
LNCipedia gene ID: lnc-SCARB2-2
Location (hg19): chr4:77057474-77068974
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 548 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT096984
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -312.9435 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCARB2-2:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SCARB2-2:9
4.0 lnc-SCARB2-2:9
4.1 lnc-SCARB2-2:9
5.0 lnc-SCARB2-2:9
5.1 lnc-CXCL11-6:6
5.2 lnc-SCARB2-2:9