Transcript: lnc-SCN4B-51:4

Basic information

LNCipedia transcript ID: lnc-SCN4B-51:4 
LNCipedia gene ID: lnc-SCN4B-51
Location (hg19): chr11:117886487-117957508
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 230 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT024433
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.1852 non-coding 
CPAT coding probability 4.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCN4B-51:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SCN4B-1:3
4.0 TMPRSS4-AS1:4
4.1 TMPRSS4-AS1:4
5.0 TMPRSS4-AS1:4
5.1 lnc-SCN4B-7:4
5.2 lnc-SCN4B-51:4