Transcript: lnc-SDC1-2:1

Basic information

LNCipedia transcript ID: lnc-SDC1-2:1 
LNCipedia gene ID: lnc-SDC1-2
Location (hg19): chr2:20508175-20550595
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 562 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT069435
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -41.5057 non-coding 
CPAT coding probability 27.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SDC1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SDC1-2:1
4.0 lnc-SDC1-2:1
4.1 lnc-SDC1-2:1
5.0 lnc-SDC1-2:1
5.1 lnc-RAD51AP2-44:1
5.2 lnc-SDC1-2:1