Transcript: lnc-SEC11A-6:10

Basic information

LNCipedia transcript ID: lnc-SEC11A-6:10 
LNCipedia gene ID: lnc-SEC11A-6
Location (hg19): chr15:85747146-85752159
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2197 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA481:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 56.4008 non-coding 
CPAT coding probability 40.76% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SEC11A-6:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SEC11A-6:10
4.1 lnc-SEC11A-6:10
5.0 lnc-SEC11A-6:10
5.1 lnc-SEC11A-6:10
5.2 lnc-SEC11A-6:10