Transcript: lnc-SEH1L-5:4

Basic information

LNCipedia transcript ID: lnc-SEH1L-5:4 
LNCipedia gene ID: lnc-SEH1L-5
Location (hg19): chr18:12884424-12889405
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4982 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000035185.1|HBMT00000659992.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.2356 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEH1L-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SEH1L-5:4
5.0 lnc-SEH1L-5:4
5.1 lnc-RIOK3-142:3
5.2 lnc-SEH1L-5:4