Transcript: lnc-SEL1L-8:1

Basic information

LNCipedia transcript ID: lnc-SEL1L-8:1 
LNCipedia gene ID: lnc-SEL1L-8
Location (hg19): chr14:84515175-84522027
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 869 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000554425; ENST00000554425.1; CTD-2335K5.1-001; OTTHUMT00000413223.1; NONHSAT038099
Alternative gene names: ENSG00000258396; CTD-2335K5.1; ENSG00000258396.1; OTTHUMG00000171384.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.5743 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEL1L-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEL1L-8:1
3.1 lnc-SEL1L-8:1
4.0 lnc-SEL1L-8:1
4.1 lnc-SEL1L-8:1
5.0 lnc-SEL1L-8:1
5.1 lnc-GALC-63:1
5.2 lnc-SEL1L-8:1