Transcript: lnc-SELENOF-10:1

Basic information

LNCipedia transcript ID: lnc-SELENOF-10:1 
LNCipedia gene ID: lnc-SELENOF-10
Location (hg19): chr1:87591688-87609970
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1025 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_81_chr1:87591687-87609970_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.0682 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SELENOF-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP4-604K5.1.1-10:1
4.0 lnc-RP4-604K5.1.1-10:1
4.1 lnc-RP4-604K5.1.1-10:1
5.0 lnc-RP4-604K5.1.1-10:1
5.1 lnc-RBMXL1-20:1
5.2 lnc-SELENOF-10:1