Transcript: lnc-SELENOF-25:1

Basic information

LNCipedia transcript ID: lnc-SELENOF-25:1 
LNCipedia gene ID: lnc-SELENOF-25
Ensembl Gene ID: ENSG00000284846
Ensembl Transcript ID: ENST00000646669
Location (hg19): chr1:87287241-87299852
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1638 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646669.1
Alternative gene names: ENSG00000284846.1; AL355981.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.8112 non-coding 
CPAT coding probability 2.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SELENOF-25:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-RBMXL1-25:1
5.1 lnc-RBMXL1-25:1
5.2 lnc-SELENOF-25:1