Transcript: lnc-SELENOF-6:1

Basic information

LNCipedia transcript ID: lnc-SELENOF-6:1 
LNCipedia gene ID: lnc-SELENOF-6
Location (hg19): chr1:87328850-87380107
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 831 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT004275
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -92.8006 non-coding 
CPAT coding probability 7.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SELENOF-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP4-604K5.1.1-6:1
4.0 lnc-RP4-604K5.1.1-6:1
4.1 lnc-RP4-604K5.1.1-6:1
5.0 lnc-RP4-604K5.1.1-6:1
5.1 lnc-RBMXL1-24:1
5.2 lnc-SELENOF-6:1