Transcript: lnc-SELENOT-4:2

Basic information

LNCipedia transcript ID: lnc-SELENOT-4:2 
LNCipedia gene ID: lnc-SELENOT-4
Location (hg19): chr3:150425455-150426817
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 434 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2495_chr3:150425454-150426812_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.9637 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SELENOT-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-392O18.1.1-4:1
4.0 lnc-RP11-392O18.1.1-4:1
4.1 lnc-RP11-392O18.1.1-4:1
5.0 lnc-RP11-392O18.1.1-4:1
5.1 lnc-SELENOT-4:1
5.2 lnc-SELENOT-4:2