Transcript: lnc-SENP6-3:4

Basic information

LNCipedia transcript ID: lnc-SENP6-3:4 
LNCipedia gene ID: lnc-SENP6-3
Ensembl Gene ID: ENSG00000225793
Ensembl Transcript ID: ENST00000607221
Location (hg19): chr6:75994749-76001217
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 915 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607221.1
Alternative gene names: ENSG00000225793.2; RP1-234P15.4; AL080250.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -179.3173 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SENP6-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SENP6-3:4
4.0 lnc-SENP6-3:4
4.1 lnc-SENP6-3:4
5.0 lnc-SENP6-3:4
5.1 lnc-CYB5R4-77:11
5.2 lnc-SENP6-3:4