Transcript: lnc-SEPHS1-1:2

Basic information

LNCipedia transcript ID: lnc-SEPHS1-1:2 
LNCipedia gene ID: lnc-SEPHS1-1
Location (hg19): chr10:13320305-13342042
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1005 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT011479
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 449.2475 coding 
CPAT coding probability 4.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SEPHS1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL138764.1-1:2
4.0 lnc-AL138764.1-1:2
4.1 lnc-AL138764.1-1:2
5.0 lnc-AL138764.1-1:2
5.1 lnc-KLF6-156:2
5.2 lnc-SEPHS1-1:2