Transcript: lnc-SERF1B-1:4

Basic information

LNCipedia transcript ID: lnc-SERF1B-1:4 
LNCipedia gene ID: lnc-SERF1B-1
Location (hg19): chr5:69140557-69217749
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1729 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT101940
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 75.4479 coding 
CPAT coding probability 51.77% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERF1B-1:4 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERF1B-1:4
4.0 lnc-SERF1B-1:4
4.1 lnc-SERF1B-1:4
5.0 lnc-SERF1B-1:4
5.1 lnc-BDP1-22:2
5.2 lnc-SERF1B-1:4