Transcript: lnc-SERHL2-1:13

Basic information

LNCipedia transcript ID: lnc-SERHL2-1:13 
LNCipedia gene ID: lnc-SERHL2-1
Location (hg19): chr22:42896610-42908565
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1687 bp
Exons: 10
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000172250.10|ENST00000455578.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 376.2097 coding 
CPAT coding probability 68.70% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERHL2-1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERHL2-1:13
5.0 lnc-SERHL2-1:13
5.1 lnc-SMDT1-8:8
5.2 lnc-SERHL2-1:13