Transcript: lnc-SERPINA4-3:1

Basic information

LNCipedia transcript ID: lnc-SERPINA4-3:1 
LNCipedia gene ID: lnc-SERPINA4-3
Location (hg19): chr14:94943354-94949280
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2754 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1043_chr14:94943353-94949280_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.5775 non-coding 
CPAT coding probability 3.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINA4-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERPINA4-3:1
4.0 lnc-SERPINA4-3:1
4.1 lnc-SERPINA4-3:1
5.0 lnc-SERPINA4-3:1
5.1 lnc-GLRX5-36:1
5.2 lnc-SERPINA4-3:1