Transcript: lnc-SERPINB1-1:2

Basic information

LNCipedia transcript ID: lnc-SERPINB1-1:2 
LNCipedia gene ID: lnc-SERPINB1-1
Location (hg19): chr6:2799891-2821743
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1251 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003mud_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.3705 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINB1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERPINB1-1:2
4.0 lnc-SERPINB1-1:2
4.1 lnc-SERPINB1-1:2
5.0 lnc-SERPINB1-1:2
5.1 lnc-ECI2-102:3
5.2 lnc-SERPINB1-1:2