Transcript: lnc-SERPIND1-1:36

Basic information

LNCipedia transcript ID: lnc-SERPIND1-1:36 
LNCipedia gene ID: lnc-SERPIND1-1
Location (hg19): chr22:21056600-21058628
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 926 bp
Exons: 7
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000436618; ENST00000436618.1; TMEM191A-002; OTTHUMT00000316650.2; NONHSAT083581; ENST00000436618.5
Alternative gene names: ENSG00000226287; TMEM191A; ENSG00000226287.3; OTTHUMG00000150164.2; ENSG00000226287.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 73.2047 coding 
CPAT coding probability 60.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERPIND1-1:36 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POM121L4P-1:4
3.1 lnc-POM121L4P-1:4
4.0 lnc-POM121L4P-1:4
4.1 lnc-POM121L4P-1:4
5.0 lnc-POM121L4P-1:4
5.1 lnc-SERPIND1-1:5
5.2 lnc-SERPIND1-1:36