Transcript: lnc-SERPINH1-3:1

Basic information

LNCipedia transcript ID: lnc-SERPINH1-3:1 
LNCipedia gene ID: lnc-SERPINH1-3
Location (hg19): chr11:75237107-75248847
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 11445 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000002955.1|ENCT00000069474.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.2997 non-coding 
CPAT coding probability 4.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINH1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERPINH1-3:1
5.0 lnc-SERPINH1-3:1
5.1 lnc-DDIAS-89:2
5.2 lnc-SERPINH1-3:1