Transcript: lnc-SERPINI1-23:1

Basic information

LNCipedia transcript ID: lnc-SERPINI1-23:1 
LNCipedia gene ID: lnc-SERPINI1-23
Location (hg19): chr3:167613736-167641795
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2676 bp
Exons: 8
Sources: Broad Institute
Alternative transcript names: TCONS_00005388
Alternative gene names: XLOC_002909; linc-MYNN-5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.1411 non-coding 
CPAT coding probability 6.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINI1-23:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SERPINI1-4:1
3.1 lnc-SERPINI1-4:2
4.0 LINC01330:1
4.1 LINC01330:1
5.0 LINC01330:1
5.1 lnc-LRRIQ4-37:1
5.2 lnc-SERPINI1-23:1