Transcript: lnc-SERTAD2-6:3

Basic information

LNCipedia transcript ID: lnc-SERTAD2-6:3 
LNCipedia gene ID: lnc-SERTAD2-6
Location (hg19): chr2:64830743-64836585
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5843 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048759.1|ENCT00000243048.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.5103 non-coding 
CPAT coding probability 3.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERTAD2-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERTAD2-6:3
5.0 lnc-SERTAD2-6:3
5.1 lnc-GKN2-103:2
5.2 lnc-SERTAD2-6:3