Transcript: lnc-SETD6-20:1

Basic information

LNCipedia transcript ID: lnc-SETD6-20:1 
LNCipedia gene ID: lnc-SETD6-20
Location (hg19): chr16:61952782-61953982
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1201 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA501:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 41.3412 non-coding 
CPAT coding probability 18.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SETD6-20:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SETD6-20:1
4.1 lnc-SETD6-20:1
5.0 lnc-SETD6-20:1
5.1 lnc-ADGRG1-100:1
5.2 lnc-SETD6-20:1