Transcript: lnc-SETSIP-2:12

Basic information

LNCipedia transcript ID: lnc-SETSIP-2:12 
LNCipedia gene ID: lnc-SETSIP-2
Location (hg19): chr1:92495586-92495944
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 359 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066476.1|FTMT20200004737.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SETSIP-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TGFBR3-2:4
5.0 lnc-TGFBR3-2:4
5.1 lnc-SETSIP-2:4
5.2 lnc-SETSIP-2:12