Transcript: lnc-SETSIP-2:16

Basic information

LNCipedia transcript ID: lnc-SETSIP-2:16 
LNCipedia gene ID: lnc-SETSIP-2
Location (hg19): chr1:92492251-92495435
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1025 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA116:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 52.018 non-coding 
CPAT coding probability 32.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SETSIP-2:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TGFBR3-2:1
4.1 lnc-TGFBR3-2:1
5.0 lnc-TGFBR3-2:1
5.1 lnc-SETSIP-2:8
5.2 lnc-SETSIP-2:16