Transcript: lnc-SFMBT1-5:1

Basic information

LNCipedia transcript ID: lnc-SFMBT1-5:1 
LNCipedia gene ID: lnc-SFMBT1-5
Location (hg19): chr3:53003249-53080766
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 579 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT089975
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.1012 non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SFMBT1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RFT1-5:1
4.0 lnc-SFMBT1-5:1
4.1 lnc-SFMBT1-5:1
5.0 lnc-SFMBT1-5:1
5.1 lnc-ACTR8-14:1
5.2 lnc-SFMBT1-5:1