Transcript: lnc-SGO1-2:1

Basic information

LNCipedia transcript ID: lnc-SGO1-2:1 
LNCipedia gene ID: lnc-SGO1-2
Location (hg19): chr3:21478312-21552478
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 567 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT088643
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 701.2139 coding 
CPAT coding probability 76.79% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SGO1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SGOL1-2:1
4.0 lnc-SGOL1-2:1
4.1 lnc-SGOL1-2:1
5.0 lnc-SGOL1-2:1
5.1 lnc-SH3BP5-64:1
5.2 lnc-SGO1-2:1