Transcript: lnc-SH3D21-4:1

Basic information

LNCipedia transcript ID: lnc-SH3D21-4:1 
LNCipedia gene ID: lnc-SH3D21-4
Location (hg19): chr1:36920902-36921205
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 304 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT002418; FPKM1_group_407_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SH3D21-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL591845.1-4:1
4.0 lnc-AL591845.1-4:1
4.1 lnc-AL591845.1-4:1
5.0 lnc-AL591845.1-4:1
5.1 lnc-NCDN-33:1
5.2 lnc-SH3D21-4:1