Transcript: lnc-SH3D21-6:1

Basic information

LNCipedia transcript ID: lnc-SH3D21-6:1 
LNCipedia gene ID: lnc-SH3D21-6
Location (hg19): chr1:37095936-37096458
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT002425
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.5132 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SH3D21-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL591845.1-6:1
4.0 lnc-AL591845.1-6:1
4.1 lnc-AL591845.1-6:1
5.0 lnc-AL591845.1-6:1
5.1 lnc-NCDN-36:1
5.2 lnc-SH3D21-6:1