Transcript: lnc-SHARPIN-4:3

Basic information

LNCipedia transcript ID: lnc-SHARPIN-4:3 
LNCipedia gene ID: lnc-SHARPIN-4
Location (hg19): chr8:145154194-145159153
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 933 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT129696
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -153.3886 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SHARPIN-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARP10-4:3
4.0 lnc-SHARPIN-4:3
4.1 lnc-SHARPIN-4:3
5.0 lnc-SHARPIN-4:3
5.1 lnc-TMEM249-24:3
5.2 lnc-SHARPIN-4:3