Transcript: lnc-SIGLEC15-2:1

Basic information

LNCipedia transcript ID: lnc-SIGLEC15-2:1 
LNCipedia gene ID: lnc-SIGLEC15-2
Location (hg19): chr18:43547474-43548465
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 992 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000035830.1|ENCT00000192507.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.9276 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIGLEC15-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIGLEC15-2:1
5.0 lnc-SIGLEC15-2:1
5.1 lnc-CTIF-50:1
5.2 lnc-SIGLEC15-2:1