Transcript: lnc-SIK1B-189:1

Basic information

LNCipedia transcript ID: lnc-SIK1B-189:1 
LNCipedia gene ID: lnc-SIK1B-189
Ensembl Gene ID: ENSG00000279784
Ensembl Transcript ID: ENST00000623587
Location (hg19): :-
Strand:
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 307 bp
Exons: 0
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623587.1
Alternative gene names: ENSG00000279784.1; CH507-39O4.1; FP236315.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.1821 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIK1B-189:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-OLIG1-189:1
5.1 lnc-OLIG1-189:1
5.2 lnc-SIK1B-189:1