Transcript: lnc-SIMC1-6:1

Basic information

LNCipedia transcript ID: lnc-SIMC1-6:1 
LNCipedia gene ID: lnc-SIMC1-6
Location (hg19): chr5:175487726-175502222
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 721 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT105289
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.3398 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIMC1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf25-6:1
4.0 lnc-C5orf25-6:1
4.1 lnc-C5orf25-6:1
5.0 lnc-C5orf25-6:1
5.1 lnc-ATP6V0E1-99:1
5.2 lnc-SIMC1-6:1