Transcript: lnc-SIPA1L1-2:12

Basic information

LNCipedia transcript ID: lnc-SIPA1L1-2:12 
LNCipedia gene ID: lnc-SIPA1L1-2
Location (hg19): chr14:71954578-71956420
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1843 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT037641; NR_027046
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.9115 non-coding 
CPAT coding probability 1.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIPA1L1-2:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIPA1L1-2:12
4.0 lnc-SIPA1L1-2:12
4.1 lnc-SIPA1L1-2:12
5.0 lnc-SIPA1L1-2:12
5.1 lnc-ACOT2-30:12
5.2 lnc-SIPA1L1-2:12