Transcript: lnc-SLA-2:2

Basic information

LNCipedia transcript ID: lnc-SLA-2:2 
LNCipedia gene ID: lnc-SLA-2
Location (hg19): chr8:134271338-134274500
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 347 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT129224
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 775.5139 coding 
CPAT coding probability 17.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLA-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLA-2:2
4.0 lnc-SLA-2:2
4.1 lnc-SLA-2:2
5.0 lnc-SLA-2:2
5.1 lnc-FAM84B-67:2
5.2 lnc-SLA-2:2