Transcript: lnc-SLAMF7-1:1

Basic information

LNCipedia transcript ID: lnc-SLAMF7-1:1 
LNCipedia gene ID: lnc-SLAMF7-1
Location (hg19): chr1:160743317-160746080
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2437 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000503092
Alternative gene names: ENSG00000250225


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.9551 non-coding 
CPAT coding probability 5.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLAMF7-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLAMF7-1:1
3.1 lnc-SLAMF7-1:1
4.0 lnc-SLAMF7-1:1
4.1 lnc-SLAMF7-1:1
5.0 lnc-SLAMF7-1:1
5.1 lnc-KLHDC9-13:1
5.2 lnc-SLAMF7-1:1